Discussion
Gatan's Digital Micrograph is one of the most commonly used software to acquire and process TEM images. While there are many useful open source scripts created by experts all around the world, there are also equally useful open source software available for all kinds of image processing, spectroscopy and relevant analysis. Here's a compilation of such links: (Please use them and acknowledge the appropriate people who developed these resources accordingly) Image analysis software/plugins linked with Digital Micrograph: https://www.gatan.com/resources/scripts http://digitalmicrograph-scripting.tavernmaker.de/HowToScript_index.htm http://www.dmscripting.com/ http://temdm.com/web/ Other Open Source Software: Image Processing, Analysis and Simulation: http://fiji.sc/ https://www.nist.gov/services-resources/software/lispix http://jp-minerals.org/vesta/en/ https://er-c.org/barthel/drprobe/ https://atomap.org/ Crystallography: http://www.shapesoftware.com/00_Website_Homepage/#anchor_cryscon https://www.fzu.cz/en/crystbox Spectroscopy: https://hyperspy.org/ http://www.eelsmodel.ua.ac.be/ Tomography and related (apart from the ones already available above): https://bio3d.colorado.edu/SerialEM/ https://bio3d.colorado.edu/imod/ https://bio3d.colorado.edu/PEET/
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